Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Gm17535J3KMR8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Gm17535J3KMR8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm17535J3KMR8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Gm45328-201ENSMUST00000210942 917 ntBASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Gm17535J3KMR8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm17535J3KMR8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm17535J3KMR8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm17535J3KMR8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm17535J3KMR8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gm17535J3KMR8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gm17535J3KMR8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Gm15794-201ENSMUST00000120182 631 ntBASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Gm27742-201ENSMUST00000184667 60 ntBASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.88■□□□□ 0.45
Gm17535J3KMR8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm17535J3KMR8 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms