Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Gm29747-201ENSMUST00000194764 585 ntBASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Nkx1-1G3UXB3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Gm23547-201ENSMUST00000158210 271 ntBASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Csnk1a1-208ENSMUST00000167187 1222 ntTSL 5 BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx1-1G3UXB3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Gm5626-201ENSMUST00000222151 1058 ntBASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Nkx1-1G3UXB3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Mir7023-201ENSMUST00000185093 64 ntBASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Gm9723-201ENSMUST00000192100 457 ntBASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Nkx1-1G3UXB3 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm16112-201ENSMUST00000159075 382 ntBASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm37709-201ENSMUST00000195074 600 ntBASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm18944-201ENSMUST00000207672 643 ntBASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 CT025526.1-201ENSMUST00000217327 267 ntBASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Nkx1-1G3UXB3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Gm44772-201ENSMUST00000207623 1191 ntBASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Nkx1-1G3UXB3 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms