Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm44394-201ENSMUST00000199558 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44484-201ENSMUST00000199873 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44466-201ENSMUST00000200264 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gm44359-201ENSMUST00000200671 138 ntBASIC20.23■□□□□ 0.83
NpcdF8VQB8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NpcdF8VQB8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.22■□□□□ 0.83
NpcdF8VQB8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NpcdF8VQB8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NpcdF8VQB8 AC131586.3-201ENSMUST00000228355 1367 ntBASIC20.21■□□□□ 0.83
NpcdF8VQB8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Gm10576-201ENSMUST00000191927 825 ntBASIC20.21■□□□□ 0.83
NpcdF8VQB8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NpcdF8VQB8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.2■□□□□ 0.82
NpcdF8VQB8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.2■□□□□ 0.82
NpcdF8VQB8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NpcdF8VQB8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.19■□□□□ 0.82
NpcdF8VQB8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NpcdF8VQB8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.19■□□□□ 0.82
NpcdF8VQB8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.18■□□□□ 0.82
NpcdF8VQB8 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
NpcdF8VQB8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
NpcdF8VQB8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms