Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.31■□□□□ 0.36
Atf6F6VAN0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Atf6F6VAN0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Atf6F6VAN0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.3■□□□□ 0.36
Atf6F6VAN0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Atf6F6VAN0 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Gm5417-201ENSMUST00000079706 384 ntBASIC17.29■□□□□ 0.36
Atf6F6VAN0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Atf6F6VAN0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.28■□□□□ 0.36
Atf6F6VAN0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Atf6F6VAN0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.28■□□□□ 0.36
Atf6F6VAN0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Atf6F6VAN0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.27■□□□□ 0.36
Atf6F6VAN0 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.27■□□□□ 0.36
Atf6F6VAN0 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Atf6F6VAN0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Atf6F6VAN0 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms