Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhb9E9Q5G2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Mir770-201ENSMUST00000103252 94 ntBASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhb9E9Q5G2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhb9E9Q5G2 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.83■□□□□ 0.76
Pcdhb9E9Q5G2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb9E9Q5G2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb9E9Q5G2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb9E9Q5G2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhb9E9Q5G2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhb9E9Q5G2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Gm33142-201ENSMUST00000193913 867 ntBASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Gm17808-201ENSMUST00000200859 894 ntBASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Gm18421-201ENSMUST00000204122 625 ntBASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhb9E9Q5G2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdhb9E9Q5G2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.79■□□□□ 0.76
Pcdhb9E9Q5G2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms