Protein–RNA interactions for Protein: E9PUP1

Syde2, Synapse defective 1, Rho GTPase, homolog 2 (C. elegans), mousemouse

Predictions only

Length 1,314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syde2E9PUP1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.02■□□□□ 0.96
Syde2E9PUP1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.02■□□□□ 0.96
Syde2E9PUP1 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syde2E9PUP1 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.02■□□□□ 0.95
Syde2E9PUP1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.02■□□□□ 0.95
Syde2E9PUP1 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syde2E9PUP1 Gm6296-201ENSMUST00000222599 943 ntBASIC21.02■□□□□ 0.95
Syde2E9PUP1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Syde2E9PUP1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44357-201ENSMUST00000195897 142 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm19658-201ENSMUST00000196231 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44367-201ENSMUST00000196836 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44350-201ENSMUST00000197197 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44390-201ENSMUST00000197533 144 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44313-201ENSMUST00000198018 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44486-201ENSMUST00000198508 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44454-201ENSMUST00000198541 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44314-201ENSMUST00000199263 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44394-201ENSMUST00000199558 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44484-201ENSMUST00000199873 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44466-201ENSMUST00000200264 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm44359-201ENSMUST00000200671 138 ntBASIC21.01■□□□□ 0.95
Syde2E9PUP1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Syde2E9PUP1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21■□□□□ 0.95
Syde2E9PUP1 Fcho2-208ENSMUST00000224992 2964 ntBASIC21■□□□□ 0.95
Syde2E9PUP1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 Gfra2-202ENSMUST00000227633 1480 ntBASIC21■□□□□ 0.95
Syde2E9PUP1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Syde2E9PUP1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21■□□□□ 0.95
Syde2E9PUP1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21■□□□□ 0.95
Syde2E9PUP1 AC161829.1-201ENSMUST00000220298 281 ntBASIC21■□□□□ 0.95
Syde2E9PUP1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21■□□□□ 0.95
Syde2E9PUP1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.99■□□□□ 0.95
Syde2E9PUP1 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Syde2E9PUP1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.98■□□□□ 0.95
Syde2E9PUP1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Syde2E9PUP1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Rprl3-201ENSMUST00000157400 290 ntBASIC20.97■□□□□ 0.95
Syde2E9PUP1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syde2E9PUP1 Gm2651-201ENSMUST00000203560 838 ntBASIC20.97■□□□□ 0.95
Syde2E9PUP1 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms