Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.5■□□□□ 0.71
Clrn2B2RVW2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.49■□□□□ 0.71
Clrn2B2RVW2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Gm27867-201ENSMUST00000184778 125 ntBASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Clrn2B2RVW2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Clrn2B2RVW2 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Gm18195-201ENSMUST00000207604 706 ntBASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Clrn2B2RVW2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 AC160338.1-201ENSMUST00000214232 705 ntBASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Clrn2B2RVW2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Gm13312-201ENSMUST00000119631 718 ntBASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clrn2B2RVW2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms