Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm12490-201ENSMUST00000120255 560 ntBASIC8.88□□□□□ -0.99
Ubr4A2AN08 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Gm17271-201ENSMUST00000165535 355 ntBASIC8.88□□□□□ -0.99
Ubr4A2AN08 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ubr4A2AN08 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 AC154572.2-201ENSMUST00000225105 997 ntBASIC8.87□□□□□ -0.99
Ubr4A2AN08 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Gm12329-201ENSMUST00000120829 1007 ntBASIC8.87□□□□□ -0.99
Ubr4A2AN08 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC8.87□□□□□ -0.99
Ubr4A2AN08 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC8.87□□□□□ -0.99
Ubr4A2AN08 AC127349.1-201ENSMUST00000224590 266 ntBASIC8.87□□□□□ -0.99
Ubr4A2AN08 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ubr4A2AN08 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC8.86□□□□□ -0.99
Ubr4A2AN08 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC8.86□□□□□ -0.99
Ubr4A2AN08 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC8.86□□□□□ -0.99
Ubr4A2AN08 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC8.86□□□□□ -0.99
Ubr4A2AN08 Gm18916-201ENSMUST00000198264 1246 ntBASIC8.86□□□□□ -0.99
Ubr4A2AN08 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Ubr4A2AN08 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms