Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.56■□□□□ 0.24
Chd7A2AJK6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Gm11780-201ENSMUST00000136880 516 ntBASIC16.56■□□□□ 0.24
Chd7A2AJK6 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chd7A2AJK6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.55■□□□□ 0.24
Chd7A2AJK6 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chd7A2AJK6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.54■□□□□ 0.24
Chd7A2AJK6 Gm14701-201ENSMUST00000117156 348 ntBASIC16.53■□□□□ 0.24
Chd7A2AJK6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Gm7506-201ENSMUST00000207758 815 ntBASIC16.53■□□□□ 0.24
Chd7A2AJK6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Mir6956-201ENSMUST00000183598 62 ntBASIC16.53■□□□□ 0.24
Chd7A2AJK6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chd7A2AJK6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd7A2AJK6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd7A2AJK6 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Chd7A2AJK6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.52■□□□□ 0.24
Chd7A2AJK6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Chd7A2AJK6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Chd7A2AJK6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd7A2AJK6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.52■□□□□ 0.23
Chd7A2AJK6 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Chd7A2AJK6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd7A2AJK6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Chd7A2AJK6 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.51■□□□□ 0.23
Chd7A2AJK6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.51■□□□□ 0.23
Chd7A2AJK6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Grk6-207ENSMUST00000225925 2769 ntBASIC16.51■□□□□ 0.23
Chd7A2AJK6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd7A2AJK6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.5■□□□□ 0.23
Chd7A2AJK6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd7A2AJK6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd7A2AJK6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd7A2AJK6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd7A2AJK6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms