Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gm3854A0A1B0GSS6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm3854A0A1B0GSS6 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm3854A0A1B0GSS6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Gm3854A0A1B0GSS6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3854A0A1B0GSS6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3854A0A1B0GSS6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm3854A0A1B0GSS6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm10052-201ENSMUST00000168019 960 ntBASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm6443-201ENSMUST00000203599 874 ntBASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm7729-201ENSMUST00000050143 801 ntBASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm3854A0A1B0GSS6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm43514-201ENSMUST00000198852 424 ntBASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm44450-201ENSMUST00000199528 114 ntBASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm3854A0A1B0GSS6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms