Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Gm715-201ENSMUST00000117865 831 ntBASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trbv17A0A140T8P8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Gm24841-201ENSMUST00000158676 357 ntBASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trbv17A0A140T8P8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv17A0A140T8P8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Timm23-208ENSMUST00000226683 750 ntBASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv17A0A140T8P8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trbv17A0A140T8P8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms