Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Igkv1-88A0A140T8N1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Flg-201ENSMUST00000050758 1488 ntBASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm45412-201ENSMUST00000210217 2275 ntBASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Igkv1-88A0A140T8N1 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm7290-201ENSMUST00000104990 617 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm12918-201ENSMUST00000120234 636 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm15710-201ENSMUST00000121821 636 ntBASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igkv1-88A0A140T8N1 Gm5075-201ENSMUST00000196916 622 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms