Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Cfap99A0A140LIX9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Gm11355-201ENSMUST00000121120 306 ntBASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cfap99A0A140LIX9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cfap99A0A140LIX9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Cfap99A0A140LIX9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cfap99A0A140LIX9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.14■□□□□ 0.82
Cfap99A0A140LIX9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Gm28033-201ENSMUST00000184224 96 ntBASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Gm17808-201ENSMUST00000200859 894 ntBASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cfap99A0A140LIX9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cfap99A0A140LIX9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cfap99A0A140LIX9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cfap99A0A140LIX9 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms