Protein–RNA interactions for Protein: A0A140LIW3

Frmpd3, FERM and PDZ domain-containing 3, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frmpd3A0A140LIW3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Frmpd3A0A140LIW3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Frmpd3A0A140LIW3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Frmpd3A0A140LIW3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Mir3113-201ENSMUST00000175478 76 ntBASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Frmpd3A0A140LIW3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Frmpd3A0A140LIW3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Frmpd3A0A140LIW3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Frmpd3A0A140LIW3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Frmpd3A0A140LIW3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Frmpd3A0A140LIW3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Frmpd3A0A140LIW3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Frmpd3A0A140LIW3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Frmpd3A0A140LIW3 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Frmpd3A0A140LIW3 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Gm26308-201ENSMUST00000157768 69 ntBASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 AC158982.1-201ENSMUST00000228377 901 ntBASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Gm37500-201ENSMUST00000192059 1443 ntBASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Frmpd3A0A140LIW3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Frmpd3A0A140LIW3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms