Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Gm5643-201ENSMUST00000117081 966 ntBASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Haglr-201ENSMUST00000100000 2085 ntBASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc194A0A140LIT1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Gm13216-201ENSMUST00000117145 591 ntBASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc194A0A140LIT1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc194A0A140LIT1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc194A0A140LIT1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc194A0A140LIT1 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc194A0A140LIT1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.77■□□□□ 0.28
Ccdc194A0A140LIT1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc194A0A140LIT1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc194A0A140LIT1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc194A0A140LIT1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc194A0A140LIT1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc194A0A140LIT1 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc194A0A140LIT1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Gm17661-201ENSMUST00000170317 270 ntBASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc194A0A140LIT1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccdc194A0A140LIT1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ccdc194A0A140LIT1 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms