Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Igkv4-54A0A0G2JES9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Igkv4-54A0A0G2JES9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.08□□□□□ -0.47
Igkv4-54A0A0G2JES9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm17661-201ENSMUST00000170317 270 ntBASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm27463-201ENSMUST00000183569 57 ntBASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Igkv4-54A0A0G2JES9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Igkv4-54A0A0G2JES9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm15565-201ENSMUST00000118890 427 ntBASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Gm7791-201ENSMUST00000219066 539 ntBASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igkv4-54A0A0G2JES9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Igkv4-54A0A0G2JES9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv4-54A0A0G2JES9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv4-54A0A0G2JES9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv4-54A0A0G2JES9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv4-54A0A0G2JES9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igkv4-54A0A0G2JES9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms