Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm10493-201ENSMUST00000097270 612 ntBASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Trav3n-3A0A0G2JEM0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms