Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igkv8-28A0A0G2JE47 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm36858-201ENSMUST00000194501 2391 ntBASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC10.59□□□□□ -0.71
Igkv8-28A0A0G2JE47 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Gm9988-201ENSMUST00000069786 435 ntBASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Igkv8-28A0A0G2JE47 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms