Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav9-4A0A0B4J1K2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav9-4A0A0B4J1K2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm13559-201ENSMUST00000120476 863 ntBASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm7889-201ENSMUST00000185591 958 ntBASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav9-4A0A0B4J1K2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Gm2274-201ENSMUST00000184539 609 ntBASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav9-4A0A0B4J1K2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms