Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ighv1-47A0A0A6YY41 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ighv1-47A0A0A6YY41 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ighv1-47A0A0A6YY41 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Ighv1-47A0A0A6YY41 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Ighv1-47A0A0A6YY41 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.9□□□□□ -0.19
Ighv1-47A0A0A6YY41 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Ighv1-47A0A0A6YY41 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Ighv1-47A0A0A6YY41 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms