Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.99□□□□□ -0.33
Trav21-dv12A0A075B6C4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm24841-201ENSMUST00000158676 357 ntBASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav21-dv12A0A075B6C4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav21-dv12A0A075B6C4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav21-dv12A0A075B6C4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav21-dv12A0A075B6C4 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav21-dv12A0A075B6C4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav21-dv12A0A075B6C4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav21-dv12A0A075B6C4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav21-dv12A0A075B6C4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Gm10653-202ENSMUST00000139570 835 ntBASIC12.95□□□□□ -0.34
Trav21-dv12A0A075B6C4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms