Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav6-5A0A075B6B5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6-5A0A075B6B5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Gm12821-201ENSMUST00000120022 600 ntBASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav6-5A0A075B6B5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.08□□□□□ -0.31
Trav6-5A0A075B6B5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trav6-5A0A075B6B5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-5A0A075B6B5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-5A0A075B6B5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav6-5A0A075B6B5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Gm6420-201ENSMUST00000193885 723 ntBASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Zfp783-201ENSMUST00000095946 670 ntBASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav6-5A0A075B6B5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms