Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm2399-201ENSMUST00000104944 225 ntBASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-6A0A075B6B2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Flg-201ENSMUST00000050758 1488 ntBASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6n-6A0A075B6B2 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6n-6A0A075B6B2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6n-6A0A075B6B2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav6n-6A0A075B6B2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms