Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav9d-1A0A075B699 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Gm37292-201ENSMUST00000192062 758 ntBASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav9d-1A0A075B699 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Gm12441-201ENSMUST00000121806 588 ntBASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Gm10517-202ENSMUST00000192970 758 ntBASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Gm4974-201ENSMUST00000209974 875 ntBASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav9d-1A0A075B699 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav9d-1A0A075B699 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Trmt13-210ENSMUST00000198454 880 ntBASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav9d-1A0A075B699 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms