Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav16A0A075B653 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Gm2399-201ENSMUST00000104944 225 ntBASIC13.07□□□□□ -0.32
Trav16A0A075B653 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.07□□□□□ -0.32
Trav16A0A075B653 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav16A0A075B653 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.06□□□□□ -0.32
Trav16A0A075B653 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.06□□□□□ -0.32
Trav16A0A075B653 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav16A0A075B653 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav16A0A075B653 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trav16A0A075B653 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.05□□□□□ -0.32
Trav16A0A075B653 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.05□□□□□ -0.32
Trav16A0A075B653 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.05□□□□□ -0.32
Trav16A0A075B653 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav16A0A075B653 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav16A0A075B653 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.04□□□□□ -0.32
Trav16A0A075B653 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms