Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13-1A0A075B644 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-1A0A075B644 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-1A0A075B644 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-1A0A075B644 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav13-1A0A075B644 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Trav13-1A0A075B644 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Gm45058-201ENSMUST00000205810 766 ntBASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Idnk-204ENSMUST00000226010 1898 ntBASIC12.02□□□□□ -0.49
Trav13-1A0A075B644 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Gm9731-201ENSMUST00000209480 747 ntBASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Gm7791-201ENSMUST00000219066 539 ntBASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav13-1A0A075B644 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Gm6598-201ENSMUST00000202719 2615 ntBASIC12□□□□□ -0.49
Trav13-1A0A075B644 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav13-1A0A075B644 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Gm43548-201ENSMUST00000197139 2353 ntBASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav13-1A0A075B644 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms