Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav7n-4A0A075B620 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav7n-4A0A075B620 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav7n-4A0A075B620 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Gm19721-201ENSMUST00000195284 1764 ntBASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Trav7n-4A0A075B620 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms