Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav16d-dv11A0A075B617 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav16d-dv11A0A075B617 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Reep4-203ENSMUST00000226563 1444 ntBASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav16d-dv11A0A075B617 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav16d-dv11A0A075B617 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Trav16d-dv11A0A075B617 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms