Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Gm22238-201ENSMUST00000175222 88 ntBASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Gm38205-201ENSMUST00000192243 258 ntBASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav4n-4A0A075B615 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav4n-4A0A075B615 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav4n-4A0A075B615 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav4n-4A0A075B615 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms