Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-6A0A075B603 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Gm26571-201ENSMUST00000181399 666 ntBASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.6□□□□□ -0.39
Trav6-6A0A075B603 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Mir5133-201ENSMUST00000174955 77 ntBASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Zfp783-201ENSMUST00000095946 670 ntBASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav6-6A0A075B603 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-6A0A075B603 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-6A0A075B603 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav6-6A0A075B603 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.58□□□□□ -0.39
Trav6-6A0A075B603 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav6-6A0A075B603 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav6-6A0A075B603 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms