Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Haglr-201ENSMUST00000100000 2085 ntBASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav9-1A0A075B601 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav9-1A0A075B601 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav9-1A0A075B601 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Gm24841-201ENSMUST00000158676 357 ntBASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Gm29257-201ENSMUST00000186115 639 ntBASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav9-1A0A075B601 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav9-1A0A075B601 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms