Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5-1A0A075B5Z7 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm37722-201ENSMUST00000193757 208 ntBASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm33142-201ENSMUST00000193913 867 ntBASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav5-1A0A075B5Z7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav5-1A0A075B5Z7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm11336-201ENSMUST00000118168 334 ntBASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav5-1A0A075B5Z7 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms