Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv4A0A075B5I2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Gm5417-201ENSMUST00000079706 384 ntBASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv4A0A075B5I2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv4A0A075B5I2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv4A0A075B5I2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv4A0A075B5I2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv4A0A075B5I2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trbv4A0A075B5I2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv4A0A075B5I2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms