Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC135068.5-201ENST00000624197 983 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC007938.2-201ENST00000604666 2634 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC004076.2-201ENST00000620532 3323 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 AC083899.1-201ENST00000454465 3819 ntBASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMIM28A0A1B0GU29 ABCA11P-202ENST00000504019 2110 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AL078621.3-201ENST00000623707 2042 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 RNU1-19P-201ENST00000363306 165 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 DBIP1-201ENST00000401435 260 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC005033.1-201ENST00000428904 813 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AURKAPS1-201ENST00000451805 1212 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 OR5M14P-201ENST00000506803 618 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 OR51A1P-201ENST00000511110 946 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 RNA5SP116-201ENST00000516132 98 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AP001357.1-201ENST00000586304 1053 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC211433.2-201ENST00000608433 387 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AP002505.2-201ENST00000623585 696 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 CYP4F35P-202ENST00000636121 390 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 AL359715.3-201ENST00000569267 2123 ntBASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SMIM28A0A1B0GU29 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 RNU1-43P-201ENST00000365052 165 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 RPS11P7-201ENST00000442125 465 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 PSAT1P4-201ENST00000466500 526 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC015864.1-201ENST00000496512 544 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC091912.1-201ENST00000511351 248 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 OR8G3P-201ENST00000533406 921 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 YWHABP2-201ENST00000540201 713 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC127381.1-201ENST00000555979 939 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 NMNAT1P5-201ENST00000559657 841 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 PRELID3BP3-201ENST00000584963 545 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 BX323046.1-201ENST00000610145 535 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SMIM28A0A1B0GU29 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 SNORD56.6-201ENST00000384569 71 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms