Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.14□□□□□ -1.59
C9orf40Q8IXQ3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 TET1P1-201ENST00000426627 2301 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 RNA5SP453-201ENST00000362503 119 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 RNA5SP132-201ENST00000364725 118 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 RN7SKP6-201ENST00000364795 319 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 MIR143-201ENST00000385300 106 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 TRAV35-201ENST00000390462 330 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 BX119904.3-201ENST00000428194 957 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 RPL5P16-201ENST00000471467 790 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 OR5AM1P-201ENST00000532136 1032 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC084824.2-201ENST00000548906 345 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC093524.1-201ENST00000564266 1094 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 H3F3BP2-201ENST00000583907 357 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC060766.1-201ENST00000590824 627 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC123769.1-201ENST00000530992 3192 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 AC004076.2-201ENST00000620532 3323 ntBASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
C9orf40Q8IXQ3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 MIPEPP2-201ENST00000422560 1819 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AL691447.1-201ENST00000419456 387 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC079355.1-201ENST00000421770 223 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 BX276092.6-201ENST00000430476 250 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC013410.1-201ENST00000436223 1232 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 RPS23P9-201ENST00000448848 438 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 BX276092.8-201ENST00000455722 250 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC100832.1-201ENST00000471945 383 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC010245.2-201ENST00000606908 1167 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 MIR6768-201ENST00000610734 72 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC015712.7-201ENST00000615211 635 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC027279.1-201ENST00000568885 4284 ntBASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
C9orf40Q8IXQ3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 RNA5SP319-201ENST00000362768 119 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 OR3A2-201ENST00000408891 1076 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 Z93019.1-201ENST00000416450 973 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 NFYAP1-201ENST00000431953 972 ntBASIC5.11□□□□□ -1.59
C9orf40Q8IXQ3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms