Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1AO00322 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1AO00322 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1AO00322 RPSAP35-201ENST00000413753 818 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 COX5BP7-201ENST00000414780 274 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.19□□□□□ -1.58
UPK1AO00322 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1AO00322 BX119321.1-201ENST00000428912 797 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 RPL7P56-201ENST00000429441 717 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 RPL7AP49-201ENST00000429522 581 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1AO00322 AL591438.1-201ENST00000433508 581 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 SUMO2P3-201ENST00000438311 288 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 AL138899.2-201ENST00000439139 499 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1AO00322 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1AO00322 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 RN7SL583P-201ENST00000475692 287 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.19□□□□□ -1.58
UPK1AO00322 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.19□□□□□ -1.58
UPK1AO00322 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1AO00322 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1AO00322 AC016839.1-201ENST00000578162 867 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 SETP3-201ENST00000581726 813 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1AO00322 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.19□□□□□ -1.58
UPK1AO00322 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1AO00322 FAM72A-208ENST00000607379 1139 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 MIR6778-201ENST00000617912 73 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 AC008691.1-209ENST00000642094 814 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
UPK1AO00322 AC114786.1-201ENST00000512892 1415 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
UPK1AO00322 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
UPK1AO00322 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.19□□□□□ -1.58
UPK1AO00322 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 Z83820.1-201ENST00000456978 1499 ntBASIC5.19□□□□□ -1.58
UPK1AO00322 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.19□□□□□ -1.58
UPK1AO00322 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
UPK1AO00322 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 AL162456.1-201ENST00000634535 2006 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 RPL34P3-201ENST00000421454 338 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 KCTD9P1-201ENST00000430462 1167 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 Z84478.1-201ENST00000438230 1219 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC073109.1-201ENST00000445066 978 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AL450996.1-201ENST00000445574 1202 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 IGBP1P3-201ENST00000447449 1000 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 AL450023.1-201ENST00000450868 751 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 PRPF38AP1-201ENST00000451976 933 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 VDAC2P4-201ENST00000452925 711 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 AC021660.1-201ENST00000465006 554 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 PSAT1P4-201ENST00000466500 526 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC007998.1-201ENST00000474156 672 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.18□□□□□ -1.58
UPK1AO00322 AC022826.1-201ENST00000519383 805 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 NMNAT1P5-201ENST00000559657 841 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 MRPS21P7-201ENST00000566937 238 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.18□□□□□ -1.58
UPK1AO00322 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 LINC02019-201ENST00000608605 2060 ntBASIC5.18□□□□□ -1.58
UPK1AO00322 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
UPK1AO00322 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
UPK1AO00322 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.18□□□□□ -1.58
UPK1AO00322 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms