Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC090543.1-201ENST00000492168 485 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RNU6-319P-201ENST00000516025 108 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RNA5SP438-201ENST00000516561 112 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 WBP1LP3-201ENST00000523033 208 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 OR4V1P-201ENST00000525394 1140 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC084121.1-201ENST00000533882 835 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC079905.1-201ENST00000549280 475 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 HSPE1P2-201ENST00000554777 306 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 CYCSP38-201ENST00000559840 322 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC079148.1-201ENST00000565944 819 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 RPL12P48-201ENST00000605620 304 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL391834.2-201ENST00000609982 546 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AL591135.1-201ENST00000401578 5914 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 ADAM24P-201ENST00000398655 2101 ntBASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TCRBV7S3A2A0A539 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC092646.2-201ENST00000431242 2095 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LYARP1-201ENST00000436977 1501 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 HSPA8P19-201ENST00000505359 1517 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AP002512.4-202ENST00000641599 4530 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 CR382285.2-201ENST00000624662 1495 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 COX6B1P3-201ENST00000312310 260 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AL121886.1-201ENST00000358609 435 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 RN7SKP145-201ENST00000363291 303 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 SNORD115-48-201ENST00000364764 76 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 RNA5SP431-201ENST00000410312 120 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC007000.2-201ENST00000442564 487 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 MEMO1P4-201ENST00000453590 386 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 MTND6P32-201ENST00000457611 483 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 EIF2S2P5-201ENST00000457635 968 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 CABYRP1-201ENST00000465493 1045 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC105918.1-201ENST00000474399 838 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC099521.1-201ENST00000482557 334 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC009120.1-201ENST00000493458 473 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 GLUD1P3-202ENST00000508551 200 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 GAPDHP71-201ENST00000511530 1003 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 SETP21-201ENST00000514799 892 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 IGLV3-24-201ENST00000517477 197 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC113192.3-201ENST00000529152 742 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC007956.1-201ENST00000555623 542 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AGGF1P7-201ENST00000562369 913 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 MIR3154-201ENST00000577829 84 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC008507.3-201ENST00000585753 472 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 MIR6133-201ENST00000617057 108 ntBASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TCRBV7S3A2A0A539 AC090772.4-201ENST00000623599 362 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 413.1 ms