Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 TMSB4XP2-201ENST00000335179 210 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 RNU6-618P-201ENST00000363518 112 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 U3.23-201ENST00000391132 200 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 OR7E101P-201ENST00000400428 513 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 RSL24D1P1-201ENST00000404972 493 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 RPS15AP30-201ENST00000420976 390 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC079355.1-201ENST00000421770 223 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC073464.3-201ENST00000422564 712 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC097721.1-201ENST00000427150 1253 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC092967.1-201ENST00000449016 481 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC023245.1-201ENST00000468501 517 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC108729.1-201ENST00000487812 947 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AL136038.1-201ENST00000497246 351 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 HAUS1P1-201ENST00000505275 832 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 RPL7L1P4-201ENST00000513004 707 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC112191.2-201ENST00000522428 333 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AP005639.1-201ENST00000526939 192 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AL121579.2-201ENST00000555466 590 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC090286.3-201ENST00000573133 187 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC245884.10-201ENST00000597355 337 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC024255.1-201ENST00000614376 102 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AC009269.6-201ENST00000621778 588 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AL357562.1-201ENST00000624911 609 ntBASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSX2IPQ9Y2D8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX2IPQ9Y2D8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.46□□□□□ -1.37
SSX2IPQ9Y2D8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SSX2IPQ9Y2D8 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 CCNB2P1-201ENST00000399411 1150 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC016739.1-201ENST00000405359 345 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC245060.4-201ENST00000413293 1121 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC019205.1-201ENST00000421830 730 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 PCBP2P1-201ENST00000437262 977 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 BX679664.2-201ENST00000439282 283 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC023141.9-201ENST00000458734 412 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 ATP5G1P3-201ENST00000463301 410 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC074386.1-201ENST00000476560 767 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 FAM60CP-201ENST00000591086 664 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC006927.4-201ENST00000639187 543 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 OR7A1P-202ENST00000641542 1158 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AC125336.1-201ENST00000508893 2827 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AL121839.2-201ENST00000565058 6943 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AL157831.2-201ENST00000564681 3095 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 AL137058.3-201ENST00000624531 3099 ntBASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SSX2IPQ9Y2D8 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 UGT2B24P-201ENST00000514441 1597 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RNU1-150P-201ENST00000362491 162 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 RN7SKP128-201ENST00000364270 303 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 SNORA11B-201ENST00000408175 129 ntBASIC6.45□□□□□ -1.38
SSX2IPQ9Y2D8 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms