Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC084754.1-201ENST00000463466 464 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC094085.1-201ENST00000468914 584 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 PSMA2P2-201ENST00000504319 686 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC138866.2-201ENST00000508650 584 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 RNU6-964P-201ENST00000516524 69 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 SCARNA20.4-201ENST00000516969 131 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC107993.1-201ENST00000591343 684 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AC012616.1-201ENST00000600294 197 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 uc_338.7-201ENST00000621834 124 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 CU639417.4-201ENST00000623928 207 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TREX1Q9NSU2 NLRP3P1-201ENST00000622303 1785 ntBASIC5.5□□□□□ -1.53
TREX1Q9NSU2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 PROS2P-201ENST00000474651 1951 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 RN7SKP6-201ENST00000364795 319 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 BX119321.1-201ENST00000428912 797 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 FMO7P-201ENST00000436045 768 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC019185.1-201ENST00000442718 389 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 RN7SL72P-201ENST00000460697 269 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC108751.3-201ENST00000461814 1020 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 SNORD46.2-201ENST00000516021 102 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC010547.6-201ENST00000571789 193 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AP000769.2-201ENST00000602344 396 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC108738.1-201ENST00000603703 237 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AL118522.2-201ENST00000616045 615 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 AL592429.1-201ENST00000403909 1473 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 XKRY2-202ENST00000623874 1581 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 XKRY-202ENST00000624960 1581 ntBASIC5.49□□□□□ -1.53
TREX1Q9NSU2 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TREX1Q9NSU2 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 Z83820.1-201ENST00000456978 1499 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC009506.2-201ENST00000420635 840 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC007998.1-201ENST00000474156 672 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 RNU6-1334P-201ENST00000516032 105 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC022826.1-201ENST00000519383 805 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 OR4A43P-201ENST00000532938 908 ntBASIC5.48□□□□□ -1.53
TREX1Q9NSU2 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.48□□□□□ -1.53
TREX1Q9NSU2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms