Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 BX119321.1-201ENST00000428912 797 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.16□□□□□ -1.58
SHC1P29353 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 RPL36AP39-201ENST00000445859 318 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AL445665.1-202ENST00000452436 324 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC022215.1-201ENST00000481770 362 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC073610.1-201ENST00000489971 396 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC105420.1-201ENST00000504389 582 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC026782.2-201ENST00000510845 636 ntBASIC5.16□□□□□ -1.58
SHC1P29353 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 MTND2P31-201ENST00000512602 616 ntBASIC5.16□□□□□ -1.58
SHC1P29353 GAPDHP62-201ENST00000515313 990 ntBASIC5.16□□□□□ -1.58
SHC1P29353 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.16□□□□□ -1.58
SHC1P29353 AC008676.3-201ENST00000521237 435 ntBASIC5.16□□□□□ -1.58
SHC1P29353 GTF2IP11-201ENST00000526931 420 ntBASIC5.16□□□□□ -1.58
SHC1P29353 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.16□□□□□ -1.58
SHC1P29353 AC079600.1-201ENST00000550326 297 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.16□□□□□ -1.58
SHC1P29353 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 AC002069.2-201ENST00000603580 883 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC007786.3-201ENST00000615154 596 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC022960.2-201ENST00000616300 666 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.16□□□□□ -1.58
SHC1P29353 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 AC010266.2-201ENST00000564741 3255 ntBASIC5.16□□□□□ -1.58
SHC1P29353 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SHC1P29353 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHC1P29353 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHC1P29353 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHC1P29353 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHC1P29353 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SHC1P29353 AL078595.2-201ENST00000605309 1780 ntBASIC5.15□□□□□ -1.58
SHC1P29353 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SHC1P29353 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHC1P29353 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.15□□□□□ -1.59
SHC1P29353 RN7SKP145-201ENST00000363291 303 ntBASIC5.15□□□□□ -1.59
SHC1P29353 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SHC1P29353 AL031985.1-201ENST00000392713 418 ntBASIC5.15□□□□□ -1.59
SHC1P29353 RPS3AP2-201ENST00000407190 754 ntBASIC5.15□□□□□ -1.59
SHC1P29353 EEF1B2P8-201ENST00000414101 671 ntBASIC5.15□□□□□ -1.59
SHC1P29353 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 AC093155.2-201ENST00000420734 937 ntBASIC5.15□□□□□ -1.59
SHC1P29353 VTI1BP4-201ENST00000427516 527 ntBASIC5.15□□□□□ -1.59
SHC1P29353 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.15□□□□□ -1.59
SHC1P29353 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.15□□□□□ -1.59
SHC1P29353 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.15□□□□□ -1.59
SHC1P29353 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.15□□□□□ -1.59
SHC1P29353 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 RPSAP51-201ENST00000497462 645 ntBASIC5.15□□□□□ -1.59
SHC1P29353 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 MRPS16P1-201ENST00000523462 412 ntBASIC5.15□□□□□ -1.59
SHC1P29353 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.15□□□□□ -1.59
SHC1P29353 HMGB1P42-201ENST00000532126 553 ntBASIC5.15□□□□□ -1.59
SHC1P29353 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.15□□□□□ -1.59
SHC1P29353 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.15□□□□□ -1.59
SHC1P29353 AC135626.1-201ENST00000556983 435 ntBASIC5.15□□□□□ -1.59
SHC1P29353 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.15□□□□□ -1.59
SHC1P29353 AC019322.1-201ENST00000571869 389 ntBASIC5.15□□□□□ -1.59
SHC1P29353 MIR4260-201ENST00000583107 67 ntBASIC5.15□□□□□ -1.59
SHC1P29353 AC063977.5-201ENST00000601044 974 ntBASIC5.15□□□□□ -1.59
SHC1P29353 MIR6133-201ENST00000617057 108 ntBASIC5.15□□□□□ -1.59
SHC1P29353 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.15□□□□□ -1.59
SHC1P29353 MIR193BHG-214ENST00000641765 509 ntBASIC5.15□□□□□ -1.59
SHC1P29353 LINC02019-201ENST00000608605 2060 ntBASIC5.15□□□□□ -1.59
SHC1P29353 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.15□□□□□ -1.59
SHC1P29353 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.15□□□□□ -1.59
SHC1P29353 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.15□□□□□ -1.59
SHC1P29353 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SHC1P29353 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SHC1P29353 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
SHC1P29353 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms