Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM54Q9BYV2 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
TRIM54Q9BYV2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM54Q9BYV2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.09□□□□□ -1.44
TRIM54Q9BYV2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 RPL11P4-201ENST00000332269 436 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 SNORA43.1-201ENST00000364863 140 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 GNG5P2-201ENST00000372054 207 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 RNU6-481P-201ENST00000384194 107 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 ANAPC10P1-201ENST00000395991 556 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AP002784.2-201ENST00000397300 549 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 RPS27AP3-201ENST00000453803 454 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC099670.1-201ENST00000455141 783 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AL445687.2-201ENST00000458156 728 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC090568.1-201ENST00000509499 856 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC034205.1-201ENST00000520621 638 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC008429.4-201ENST00000521201 182 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 HNRNPCP1-201ENST00000556181 766 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC010735.1-201ENST00000567305 1026 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC027229.1-201ENST00000583887 253 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 SUMO2P14-201ENST00000604488 293 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AL159169.2-201ENST00000610061 1269 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AL669942.2-201ENST00000620352 697 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC006927.2-201ENST00000639256 389 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC092724.1-201ENST00000624623 3397 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC024651.2-201ENST00000562480 2098 ntBASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM54Q9BYV2 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 HDAC1P2-201ENST00000453661 1398 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 RNU1-49P-201ENST00000363468 159 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 RNU5E-10P-201ENST00000363506 118 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC015977.1-201ENST00000418887 292 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC008173.1-201ENST00000418901 264 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC006065.1-201ENST00000422539 802 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC115285.1-201ENST00000424879 736 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC021876.1-201ENST00000425959 359 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC016027.5-201ENST00000427227 210 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 FABP5P3-201ENST00000437960 408 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC044797.1-201ENST00000445744 679 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 RN7SL352P-201ENST00000466002 277 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AL035690.1-201ENST00000490892 383 ntBASIC6.07□□□□□ -1.44
TRIM54Q9BYV2 AC098862.1-201ENST00000504991 413 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms