Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC006600.2-201ENST00000624834 2506 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 LYARP1-201ENST00000436977 1501 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC112198.2-201ENST00000426589 6996 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 RNA5SP232-201ENST00000364144 119 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC007161.1-204ENST00000423039 460 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 RPL12P18-201ENST00000437175 325 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AL358876.1-201ENST00000453364 1075 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC022215.1-201ENST00000481770 362 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AL845552.1-201ENST00000556820 323 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 NMNAT1P5-201ENST00000559657 841 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 CYCSP38-201ENST00000559840 322 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 MIR3154-201ENST00000577829 84 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 RN7SL290P-201ENST00000578661 300 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC010503.3-201ENST00000594355 540 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC007842.1-201ENST00000597336 2039 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC092944.2-201ENST00000605443 889 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AL356608.1-201ENST00000610034 820 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 HTR1DP1-201ENST00000616500 888 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 MIR6813-201ENST00000621638 56 ntBASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC42Q96M95 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CCDC42Q96M95 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC42Q96M95 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC42Q96M95 TMSB4XP2-201ENST00000335179 210 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 RNA5SP273-201ENST00000362484 113 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AL022331.1-201ENST00000429025 477 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 RPS10P18-201ENST00000442662 495 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 TIMM8BP2-201ENST00000445940 251 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 RNA5SP438-201ENST00000516561 112 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC020937.1-201ENST00000519677 1013 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC079905.1-201ENST00000549280 475 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 AL049840.6-201ENST00000604583 345 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 AC026367.3-201ENST00000619032 590 ntBASIC5.94□□□□□ -1.46
CCDC42Q96M95 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC42Q96M95 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC42Q96M95 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC42Q96M95 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 AC003973.3-201ENST00000624863 2822 ntBASIC5.93□□□□□ -1.46
CCDC42Q96M95 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC42Q96M95 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 NPM1P38-201ENST00000403835 865 ntBASIC5.93□□□□□ -1.46
CCDC42Q96M95 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC42Q96M95 FAM183DP-201ENST00000421987 399 ntBASIC5.93□□□□□ -1.46
CCDC42Q96M95 RPL7AP49-201ENST00000429522 581 ntBASIC5.93□□□□□ -1.46
CCDC42Q96M95 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC42Q96M95 HMGB3P24-201ENST00000433260 622 ntBASIC5.93□□□□□ -1.46
CCDC42Q96M95 AL591438.1-201ENST00000433508 581 ntBASIC5.93□□□□□ -1.46
CCDC42Q96M95 AC007679.3-201ENST00000434035 414 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms