Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CMC4P56277 RNA5SP394-201ENST00000364216 119 ntBASIC4.22□□□□□ -1.73
CMC4P56277 RN7SKP6-201ENST00000364795 319 ntBASIC4.22□□□□□ -1.73
CMC4P56277 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 RN7SKP286-201ENST00000410894 299 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.22□□□□□ -1.73
CMC4P56277 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 AC093155.2-201ENST00000420734 937 ntBASIC4.22□□□□□ -1.73
CMC4P56277 TNPO1P1-201ENST00000423641 1138 ntBASIC4.22□□□□□ -1.73
CMC4P56277 RIMKLBP2-201ENST00000424737 654 ntBASIC4.22□□□□□ -1.73
CMC4P56277 USP24P1-201ENST00000433802 779 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 NANOGP9-201ENST00000439890 892 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC064862.4-201ENST00000442180 334 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.22□□□□□ -1.73
CMC4P56277 AC004129.2-201ENST00000457229 287 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC135999.1-201ENST00000478962 479 ntBASIC4.22□□□□□ -1.73
CMC4P56277 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.22□□□□□ -1.73
CMC4P56277 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 TRIM51DP-201ENST00000529746 596 ntBASIC4.22□□□□□ -1.73
CMC4P56277 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 MIR4420-201ENST00000583944 77 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AL352984.2-201ENST00000611153 546 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC005899.7-201ENST00000618199 588 ntBASIC4.22□□□□□ -1.73
CMC4P56277 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.22□□□□□ -1.73
CMC4P56277 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC022919.1-201ENST00000624979 626 ntBASIC4.22□□□□□ -1.73
CMC4P56277 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.22□□□□□ -1.73
CMC4P56277 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 AC004158.1-201ENST00000564508 4319 ntBASIC4.22□□□□□ -1.73
CMC4P56277 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CMC4P56277 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.22□□□□□ -1.73
CMC4P56277 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CMC4P56277 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.22□□□□□ -1.73
CMC4P56277 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CMC4P56277 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CMC4P56277 AC232271.1-201ENST00000602455 2715 ntBASIC4.22□□□□□ -1.73
CMC4P56277 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CMC4P56277 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CMC4P56277 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC4.21□□□□□ -1.73
CMC4P56277 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CMC4P56277 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC4.21□□□□□ -1.73
CMC4P56277 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC4.21□□□□□ -1.73
CMC4P56277 ZNF658B-201ENST00000602828 3408 ntBASIC4.21□□□□□ -1.73
CMC4P56277 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CMC4P56277 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CMC4P56277 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 IARS-213ENST00000627121 4587 ntTSL 5 BASIC4.21□□□□□ -1.74
CMC4P56277 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CMC4P56277 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 RNA5SP131-201ENST00000365452 119 ntBASIC4.21□□□□□ -1.74
CMC4P56277 RNA5SP30-201ENST00000365552 115 ntBASIC4.21□□□□□ -1.74
CMC4P56277 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.21□□□□□ -1.74
CMC4P56277 MIR130A-201ENST00000385274 89 ntBASIC4.21□□□□□ -1.74
CMC4P56277 SNORA17A-201ENST00000391185 133 ntBASIC4.21□□□□□ -1.74
CMC4P56277 AL031985.1-201ENST00000392713 418 ntBASIC4.21□□□□□ -1.74
CMC4P56277 OR2W4P-201ENST00000406496 926 ntBASIC4.21□□□□□ -1.74
CMC4P56277 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CMC4P56277 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 Z93019.1-201ENST00000416450 973 ntBASIC4.21□□□□□ -1.74
CMC4P56277 MTND6P12-201ENST00000428247 522 ntBASIC4.21□□□□□ -1.74
CMC4P56277 RPL34P27-201ENST00000428810 349 ntBASIC4.21□□□□□ -1.74
CMC4P56277 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 AL161636.2-201ENST00000445179 927 ntBASIC4.21□□□□□ -1.74
CMC4P56277 IGBP1P3-201ENST00000447449 1000 ntBASIC4.21□□□□□ -1.74
CMC4P56277 AL596266.1-201ENST00000448132 400 ntBASIC4.21□□□□□ -1.74
CMC4P56277 YWHAEP1-201ENST00000453697 763 ntBASIC4.21□□□□□ -1.74
CMC4P56277 RPL5P12-201ENST00000477071 851 ntBASIC4.21□□□□□ -1.74
CMC4P56277 RPL7P51-201ENST00000490532 749 ntBASIC4.21□□□□□ -1.74
CMC4P56277 DUTP1-201ENST00000493631 470 ntBASIC4.21□□□□□ -1.74
CMC4P56277 GOLGA5P1-201ENST00000507317 980 ntBASIC4.21□□□□□ -1.74
CMC4P56277 ST13P12-201ENST00000508958 1094 ntBASIC4.21□□□□□ -1.74
CMC4P56277 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.21□□□□□ -1.74
CMC4P56277 MTATP6P1-201ENST00000514057 681 ntBASIC4.21□□□□□ -1.74
CMC4P56277 GAPDHP62-201ENST00000515313 990 ntBASIC4.21□□□□□ -1.74
CMC4P56277 AC021146.10-201ENST00000515628 706 ntBASIC4.21□□□□□ -1.74
CMC4P56277 RN7SKP5-201ENST00000517045 272 ntBASIC4.21□□□□□ -1.74
CMC4P56277 OR8Q1P-201ENST00000526467 655 ntBASIC4.21□□□□□ -1.74
CMC4P56277 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CMC4P56277 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 AC022404.1-201ENST00000555320 273 ntBASIC4.21□□□□□ -1.74
CMC4P56277 AC015720.2-201ENST00000567709 334 ntBASIC4.21□□□□□ -1.74
CMC4P56277 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.21□□□□□ -1.74
CMC4P56277 AC015802.2-201ENST00000589690 189 ntBASIC4.21□□□□□ -1.74
CMC4P56277 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms