Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 BX284632.2-201ENST00000421091 399 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 MTND4P24-201ENST00000424002 397 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.33□□□□□ -1.56
APOBEC1P41238 DEFA9P-201ENST00000433042 285 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AL606490.7-201ENST00000433136 191 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AC096775.1-201ENST00000437724 448 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AL512605.1-202ENST00000441919 381 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AL359955.2-201ENST00000445380 353 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 SUMO2P1-206ENST00000445436 284 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 EIF2S2P4-201ENST00000461070 984 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AP002884.1-201ENST00000479691 655 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 RPL38P3-201ENST00000484463 213 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 RN7SKP70-201ENST00000516655 271 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 RNA5SP340-201ENST00000517132 107 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AC027369.2-201ENST00000528030 440 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 TOMM20P1-201ENST00000534518 427 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC122134.1-202ENST00000569111 1201 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 GARSP1-201ENST00000570895 719 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 TXNP4-201ENST00000575018 310 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.33□□□□□ -1.56
APOBEC1P41238 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AP001267.4-201ENST00000602598 545 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AL133370.2-201ENST00000619934 439 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AC024884.1-201ENST00000620583 399 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 AC110792.3-201ENST00000595906 1614 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
APOBEC1P41238 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 AF287957.1-201ENST00000607368 1595 ntBASIC5.33□□□□□ -1.56
APOBEC1P41238 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
APOBEC1P41238 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
APOBEC1P41238 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 IFIT1P1-201ENST00000400497 1449 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 SAMM50P1-201ENST00000455403 1399 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC009501.3-201ENST00000605001 1352 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 Z95114.1-201ENST00000624264 14574 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
APOBEC1P41238 NACAP7-201ENST00000407371 609 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 RPL24P2-201ENST00000421023 475 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 UBE2V1P6-201ENST00000430840 422 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 ZNF965P-201ENST00000432501 817 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 MTND2P21-201ENST00000436242 1042 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 CCRL1P1-201ENST00000449542 1053 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 CST12P-201ENST00000457644 362 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC093663.2-201ENST00000484625 313 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 RN7SL193P-201ENST00000491708 276 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC104629.1-201ENST00000494226 508 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 OR9N1P-202ENST00000494289 481 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC015864.1-201ENST00000496512 544 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.32□□□□□ -1.56
APOBEC1P41238 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 AC025458.1-201ENST00000506046 166 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.32□□□□□ -1.56
APOBEC1P41238 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 RFPL4AP3-201ENST00000515267 345 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC078899.1-201ENST00000521432 1185 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.32□□□□□ -1.56
APOBEC1P41238 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.32□□□□□ -1.56
APOBEC1P41238 PCNAP4-201ENST00000532690 730 ntBASIC5.32□□□□□ -1.56
APOBEC1P41238 AC090424.1-201ENST00000535243 736 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms