Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GAPDHP71-201ENST00000511530 1003 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC114781.3-201ENST00000512083 142 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 TMEM97P2-201ENST00000517841 403 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AL021707.7-201ENST00000607991 416 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 CASC19-260ENST00000641828 2001 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 AL049634.1-201ENST00000453770 1720 ntBASIC6.79□□□□□ -1.32
UPF3BQ9BZI7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC091305.2-201ENST00000624049 1576 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC027279.1-201ENST00000568885 4284 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AL159987.1-201ENST00000347911 293 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 RNU1-150P-201ENST00000362491 162 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 EEF1B2P8-201ENST00000414101 671 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 RNGTTP1-201ENST00000420965 728 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 MEMO1P4-201ENST00000453590 386 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 RPSAP37-201ENST00000470913 821 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AL122020.1-201ENST00000472287 459 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 OR8Q1P-201ENST00000526467 655 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC093524.1-201ENST00000564266 1094 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 MIR1273E-201ENST00000581165 102 ntBASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
UPF3BQ9BZI7 AC007842.1-201ENST00000597336 2039 ntBASIC6.77□□□□□ -1.32
UPF3BQ9BZI7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 RN7SKP185-201ENST00000362813 326 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 SNORA74A-201ENST00000364089 198 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 U3.25-201ENST00000391209 220 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC005042.1-201ENST00000393397 800 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AL163193.1-201ENST00000444895 788 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC008410.1-201ENST00000483777 339 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC073610.1-201ENST00000489971 396 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC009120.1-201ENST00000493458 473 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 OR51A1P-201ENST00000511110 946 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 ATP5LP3-201ENST00000514223 304 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 IGKV2-18-201ENST00000522607 343 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 HMGN2P36-201ENST00000529541 409 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC084824.2-201ENST00000548906 345 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 HSPE1P2-201ENST00000554777 306 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC020978.7-201ENST00000575953 1187 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AL157762.1-201ENST00000619612 415 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 AC018809.2-201ENST00000602436 3823 ntBASIC6.77□□□□□ -1.33
UPF3BQ9BZI7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms