Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC107958.1-201ENST00000556576 290 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC019322.1-201ENST00000571869 389 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 MIR4271-201ENST00000582451 67 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AL139124.1-201ENST00000609123 421 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 MAPK10-328ENST00000641553 4009 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC006600.2-201ENST00000624834 2506 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 AC026523.2-201ENST00000625039 7739 ntBASIC4.75□□□□□ -1.65
RTN4IP1Q8WWV3 OR4F13P-202ENST00000560066 2054 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 IFIT1P1-201ENST00000400497 1449 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AL121886.1-201ENST00000358609 435 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 RN7SKP81-201ENST00000365603 331 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC004386.1-201ENST00000393214 761 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC019205.1-201ENST00000421830 730 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 TMEM183AP1-205ENST00000432739 290 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 VN1R110P-201ENST00000438988 971 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AL157777.1-201ENST00000468100 304 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 RN7SL741P-201ENST00000482473 289 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 RPL37P23-201ENST00000492641 294 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC025458.1-201ENST00000506046 166 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 SNORA70.11-201ENST00000515987 138 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 SNORA70.13-201ENST00000516116 138 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 GTF2IP11-201ENST00000526931 420 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC027369.2-201ENST00000528030 440 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AP001284.1-201ENST00000528393 2118 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC139697.1-201ENST00000548429 745 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC091078.2-201ENST00000557145 559 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00556-201ENST00000569603 412 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC090286.3-201ENST00000573133 187 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 OOSP1P2-201ENST00000579644 351 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC024884.1-201ENST00000620583 399 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC025262.3-201ENST00000623666 360 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AC129778.1-202ENST00000623812 261 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AL591379.1-207ENST00000635982 261 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 OR11H2-202ENST00000641517 1085 ntBASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RTN4IP1Q8WWV3 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 RNA5SP433-201ENST00000364491 114 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 VN1R12P-201ENST00000403778 876 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 AL354890.1-201ENST00000413730 346 ntBASIC4.73□□□□□ -1.65
RTN4IP1Q8WWV3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms