Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AL161912.3-201ENST00000605404 628 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AL365181.4-201ENST00000609800 547 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AL031658.2-201ENST00000616850 651 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.98□□□□□ -1.45
SIX2Q9NPC8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
SIX2Q9NPC8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 MT-RNR2-201ENST00000387347 1559 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 NR1H5P-201ENST00000452683 1377 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 RPS3AP2-201ENST00000407190 754 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 RMRPP5-201ENST00000411156 267 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 SLC20A1P1-201ENST00000413906 956 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 RFESDP1-201ENST00000422350 461 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC113412.1-201ENST00000425840 504 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 OR6D1P-201ENST00000436165 939 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC005297.1-201ENST00000444765 862 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 TAAR4P-201ENST00000454843 1039 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 RN7SL188P-201ENST00000469842 285 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 RNU6-751P-201ENST00000516382 101 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 SNORA43.3-201ENST00000517240 103 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 IGKV2-4-201ENST00000523070 340 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 OR11H3P-201ENST00000554547 982 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AL162574.1-201ENST00000615702 950 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC135068.5-201ENST00000624197 983 ntBASIC5.97□□□□□ -1.45
SIX2Q9NPC8 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SIX2Q9NPC8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.96□□□□□ -1.45
SIX2Q9NPC8 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.96□□□□□ -1.45
SIX2Q9NPC8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SIX2Q9NPC8 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SIX2Q9NPC8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.96□□□□□ -1.45
SIX2Q9NPC8 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
SIX2Q9NPC8 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 LINC02019-201ENST00000608605 2060 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 PPIAP9-201ENST00000403866 498 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AL450023.1-201ENST00000450868 751 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AL035090.1-201ENST00000454835 332 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 PFN1P8-201ENST00000497012 543 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC130364.2-201ENST00000528639 604 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms