Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 HSPD1P11-201ENST00000508643 1702 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RN7SKP55-201ENST00000364888 307 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 SNORA70H-201ENST00000383910 135 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 SNORA70J-201ENST00000384182 135 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OOSP1-201ENST00000398992 1270 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL451046.1-201ENST00000406097 534 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL445213.1-201ENST00000412589 747 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 LINC01881-201ENST00000416103 412 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL356320.2-201ENST00000417263 507 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OR5BE1P-201ENST00000425977 939 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MYL6P3-201ENST00000436904 432 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MTCYBP39-201ENST00000437562 491 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL845321.1-201ENST00000444603 348 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TPTE2P6-202ENST00000445572 1007 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TRY2P-201ENST00000448860 689 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OR52J1P-201ENST00000450596 932 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RPL12P26-201ENST00000452430 487 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RPS4XP6-201ENST00000477670 797 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RN7SL741P-201ENST00000482473 289 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RN7SL187P-201ENST00000495587 303 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC116353.3-201ENST00000511215 249 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC139713.1-202ENST00000512366 460 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 NRON-201ENST00000517270 370 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 CARSP2-201ENST00000520688 277 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OR5AM1P-201ENST00000532136 1032 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC069240.2-201ENST00000550242 609 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RBM22P1-201ENST00000578589 1214 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 WDR45BP1-201ENST00000583470 1029 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 RPS27AP19-201ENST00000597285 458 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MTND3P19-201ENST00000603825 345 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL035410.2-201ENST00000604963 864 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC092354.2-201ENST00000607786 514 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL355073.2-201ENST00000612106 557 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 TCL6_3.1-201ENST00000619064 137 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AC087894.3-201ENST00000623682 349 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 OR5BE1P-202ENST00000641168 1176 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 ATP5BP1-201ENST00000411980 1574 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 AL049737.1-201ENST00000413920 1403 ntBASIC6.93□□□□□ -1.3
FOXP3Q9BZS1 MTCO1P25-201ENST00000414449 1799 ntBASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 AC102941.1-201ENST00000567616 1537 ntBASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 SNORD56.4-201ENST00000363883 71 ntBASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 MIR99A-201ENST00000384906 81 ntBASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 LDHAP5-201ENST00000394996 622 ntBASIC6.92□□□□□ -1.3
FOXP3Q9BZS1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms