Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 NDUFAF4P2-201ENST00000445374 520 ntBASIC9.1□□□□□ -0.95
IFT140Q96RY7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 CYCSP42-201ENST00000450823 238 ntBASIC9.1□□□□□ -0.95
IFT140Q96RY7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 AP000919.1-201ENST00000582850 985 ntBASIC9.1□□□□□ -0.95
IFT140Q96RY7 EIF3FP1-201ENST00000613970 806 ntBASIC9.1□□□□□ -0.95
IFT140Q96RY7 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
IFT140Q96RY7 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
IFT140Q96RY7 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
IFT140Q96RY7 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC9.1□□□□□ -0.95
IFT140Q96RY7 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
IFT140Q96RY7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 AC034205.1-201ENST00000520621 638 ntBASIC9.09□□□□□ -0.95
IFT140Q96RY7 AC011487.3-201ENST00000593607 453 ntBASIC9.09□□□□□ -0.95
IFT140Q96RY7 NANOGP3-201ENST00000605855 286 ntBASIC9.09□□□□□ -0.95
IFT140Q96RY7 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
IFT140Q96RY7 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
IFT140Q96RY7 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 AC123769.2-201ENST00000624332 5984 ntBASIC9.09□□□□□ -0.95
IFT140Q96RY7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
IFT140Q96RY7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC9.09□□□□□ -0.95
IFT140Q96RY7 AC005224.3-201ENST00000584683 2140 ntBASIC9.09□□□□□ -0.95
IFT140Q96RY7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 P2RY10P2-201ENST00000416730 913 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC012519.1-201ENST00000424588 610 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL596266.1-201ENST00000448132 400 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 RPS23P7-201ENST00000466210 444 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC103987.1-201ENST00000473394 348 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 TOMM20P2-201ENST00000540082 421 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 UBE2FP2-201ENST00000566646 462 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL513327.3-201ENST00000602618 469 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC245389.2-201ENST00000616023 576 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC242843.1-201ENST00000618702 573 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL121768.1-201ENST00000613917 2544 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 MT-RNR2-201ENST00000387347 1559 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 RPL18P10-201ENST00000425606 538 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 DNAJC19P7-201ENST00000428811 344 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 RN7SL354P-201ENST00000469282 294 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 AL161747.1-201ENST00000480068 358 ntBASIC9.08□□□□□ -0.96
IFT140Q96RY7 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC9.08□□□□□ -0.96
IFT140Q96RY7 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
IFT140Q96RY7 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 AC005618.1-201ENST00000606901 3148 ntBASIC9.07□□□□□ -0.96
IFT140Q96RY7 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 POLQ-201ENST00000264233 8775 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC9.07□□□□□ -0.96
IFT140Q96RY7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
IFT140Q96RY7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC9.07□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms