Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 RNU1-24P-201ENST00000364285 165 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 RNA5SP131-201ENST00000365452 119 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 RNU11-6P-201ENST00000391127 133 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 CYB5AP4-201ENST00000396692 399 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AL357752.1-201ENST00000412817 349 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.91□□□□□ -1.46
PDGFBP01127 MRPS21P3-201ENST00000436696 262 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 RPS11P7-201ENST00000442125 465 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AC019185.1-201ENST00000442718 389 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.91□□□□□ -1.46
PDGFBP01127 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC5.91□□□□□ -1.46
PDGFBP01127 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 RPL7P45-201ENST00000455851 743 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 RN7SL51P-201ENST00000468230 285 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 RPL5P16-201ENST00000471467 790 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 RPL7P6-201ENST00000480903 738 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 AC106800.2-201ENST00000514009 1103 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AP000676.2-201ENST00000529711 301 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 AC234775.3-201ENST00000564612 656 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFBP01127 GARSP1-201ENST00000570895 719 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFBP01127 AC087468.1-201ENST00000604365 630 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AC139493.1-201ENST00000604368 397 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 AC126915.2-201ENST00000610957 190 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 AC138627.1-204ENST00000641894 765 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 CDY5P-201ENST00000411487 1580 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 CDY9P-201ENST00000451397 1580 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFBP01127 AC112255.1-201ENST00000624070 2493 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC5.91□□□□□ -1.46
PDGFBP01127 FO082842.1-201ENST00000423552 1370 ntBASIC5.91□□□□□ -1.46
PDGFBP01127 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
PDGFBP01127 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PDGFBP01127 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 AP000866.6-201ENST00000638898 3579 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AC105114.1-201ENST00000624795 1862 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 AL159987.1-201ENST00000347911 293 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 U3.2-201ENST00000362981 210 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
PDGFBP01127 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFBP01127 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.9□□□□□ -1.46
PDGFBP01127 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 AC091390.1-201ENST00000433904 331 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFBP01127 CUBNP2-201ENST00000443534 1139 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AL161722.1-201ENST00000446972 1032 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 AP000547.1-201ENST00000454360 617 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AL035090.1-201ENST00000454835 332 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AL157777.1-201ENST00000468100 304 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFBP01127 BX284632.1-201ENST00000478218 541 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFBP01127 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.9□□□□□ -1.46
PDGFBP01127 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFBP01127 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.9□□□□□ -1.46
PDGFBP01127 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFBP01127 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.9□□□□□ -1.46
PDGFBP01127 AC018558.5-201ENST00000565840 952 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 MRPS21P7-201ENST00000566937 238 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 MIR4330-201ENST00000579077 105 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.9□□□□□ -1.46
PDGFBP01127 AF230666.2-201ENST00000602328 725 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AC145423.1-201ENST00000605712 336 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AL022394.1-201ENST00000606979 292 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 AC091953.3-201ENST00000623220 236 ntBASIC5.9□□□□□ -1.46
PDGFBP01127 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
PDGFBP01127 MAPK10-350ENST00000641777 965 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms